STRINGSTRING
EHK20655 protein (Hypocrea virens) - STRING interaction network
"EHK20655" - Putative polyketide synthase in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHK20655Putative polyketide synthase (1884 aa)    
Predicted Functional Partners:
EHK20651
Hypothetical protein (556 aa)
 
          0.527
EHK16310
Hypothetical protein (239 aa)
 
          0.477
EHK21096
Hypothetical protein (547 aa)
 
          0.434
EHK21094
Hypothetical protein (1510 aa)
 
          0.408
EHK19932
Non-ribosomal peptide synthetase (3148 aa)
 
          0.405
EHK22005
Putative non-ribosomal peptide synthetase GliP (2032 aa)
 
          0.404
EHK16304
Hypothetical protein (500 aa)
 
          0.403
EHK21783
Hypothetical protein (718 aa)
 
          0.403
EHK26732
Non-ribosomal peptide synthetase (1125 aa)
 
          0.402
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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