STRINGSTRING
CLP1 protein (Hypocrea virens) - STRING interaction network
"CLP1" - Hypothetical protein in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLP1Hypothetical protein; Required for endonucleolytic cleavage during polyadenylation-dependent pre-mRNA 3’-end formation (451 aa)    
Predicted Functional Partners:
EHK19148
Hypothetical protein (263 aa)
       
  0.972
EHK18261
Hypothetical protein (695 aa)
       
  0.972
EHK23545
Hypothetical protein (980 aa)
     
  0.942
EHK15764
Hypothetical protein (300 aa)
     
  0.935
EHK25429
Hypothetical protein (1440 aa)
     
  0.911
EHK15577
Hypothetical protein (617 aa)
     
  0.899
EHK15851
Hypothetical protein (873 aa)
     
  0.879
EHK23441
Hypothetical protein (957 aa)
     
  0.845
EHK26471
Hypothetical protein (553 aa)
     
  0.837
EHK21501
Hypothetical protein (210 aa)
     
  0.837
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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