STRINGSTRING
EHK20888 protein (Hypocrea virens) - STRING interaction network
"EHK20888" - Hypothetical protein in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHK20888Hypothetical protein (170 aa)    
Predicted Functional Partners:
EHK17729
Hypothetical protein (346 aa)
       
 
  0.756
EHK18237
Hypothetical protein (480 aa)
     
 
  0.754
EHK26420
Hypothetical protein (372 aa)
     
 
  0.731
EHK26372
Hypothetical protein (376 aa)
     
 
  0.731
EHK22095
Hypothetical protein (352 aa)
     
 
  0.731
EHK23612
Hypothetical protein (256 aa)
     
 
  0.724
EHK21303
Hypothetical protein (304 aa)
     
 
  0.724
EHK16861
Hypothetical protein (257 aa)
     
 
  0.724
EHK24958
Hypothetical protein (475 aa)
     
 
  0.687
EHK23855
Hypothetical protein (525 aa)
     
 
  0.687
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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