STRINGSTRING
NPKA protein (Hypocrea virens) - STRING interaction network
"NPKA" - Serine threonine protein kinase in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPKASerine threonine protein kinase (473 aa)    
Predicted Functional Partners:
EHK22176
Hypothetical protein (306 aa)
     
  0.933
EHK24740
Hypothetical protein (436 aa)
     
  0.675
EHK20686
Hypothetical protein (418 aa)
     
  0.675
EHK19452
Hypothetical protein (351 aa)
     
  0.672
EHK19662
Hypothetical protein (704 aa)
       
  0.629
EHK18706
Hypothetical protein (322 aa)
     
  0.626
CK1c
Casein kinase 1 (468 aa)
   
   
  0.590
CK1a
Casein kinase I (370 aa)
   
   
  0.550
EHK19769
Hypothetical protein (352 aa)
   
     
  0.504
EHK18449
Hypothetical protein (365 aa)
   
     
  0.490
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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