STRINGSTRING
TIF6 protein (Hypocrea virens) - STRING interaction network
"TIF6" - Hypothetical protein in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TIF6Hypothetical protein; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export (246 aa)    
Predicted Functional Partners:
EHK20259
Hypothetical protein (128 aa)
     
 
  0.967
EHK22389
Hypothetical protein; Involved in the biogenesis of the 60S ribosomal subunit (658 aa)
   
 
  0.956
EHK17660
Hypothetical protein (258 aa)
     
 
  0.943
EHK26441
Hypothetical protein (553 aa)
     
 
  0.941
EHK26573
Hypothetical protein (301 aa)
     
 
  0.938
EHK15443
Hypothetical protein (305 aa)
   
 
  0.938
EHK27306
Hypothetical protein (684 aa)
     
 
  0.934
EHK26475
Hypothetical protein (193 aa)
   
      0.934
EHK24429
Hypothetical protein (391 aa)
     
 
  0.930
EHK17623
Hypothetical protein (1062 aa)
     
 
  0.925
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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