STRINGSTRING
tmk3 protein (Hypocrea virens) - STRING interaction network
"tmk3" - Mitogen activated protein kinase Tmk3 in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmk3Mitogen activated protein kinase Tmk3 (356 aa)    
Predicted Functional Partners:
EHK17019
Hypothetical protein (649 aa)
     
0.960
EHK26366
Hypothetical protein (2144 aa)
       
  0.958
EHK16503
Hypothetical protein (501 aa)
   
0.953
EHK19075
Hypothetical protein (602 aa)
     
0.950
EHK16052
Hypothetical protein (924 aa)
       
  0.948
EHK19802
Hypothetical protein (603 aa)
       
  0.940
SKN7
Two-component response regulator receiver (590 aa)
       
  0.931
EHK19662
Hypothetical protein (704 aa)
       
  0.929
EHK23570
Hypothetical protein (456 aa)
       
  0.924
EHK27143
Hypothetical protein (519 aa)
       
  0.897
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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