STRINGSTRING
ECH3 protein (Hypocrea virens) - STRING interaction network
"ECH3" - Glycoside hydrolase family 18 protein in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECH3Glycoside hydrolase family 18 protein (526 aa)    
Predicted Functional Partners:
EHK26781
Glycoside hydrolase family 18 protein (411 aa)
         
  0.715
EHK24405
Glycoside hydrolase family 18 protein (321 aa)
         
  0.715
EHK20848
Glycoside hydrolase family 18 protein (401 aa)
         
  0.715
CHT1.1
Glycoside hydrolase family 18 protein (397 aa)
         
  0.715
EHK17396
Glycoside hydrolase family 18 protein (1098 aa)
         
  0.715
CHT1.2
Glycoside hydrolase family 18 protein (397 aa)
         
  0.715
NAG2
Glycoside hydrolase family 20 protein (602 aa)
         
  0.714
NAG1
Glycoside hydrolase family 20 protein (580 aa)
         
  0.714
EHK24036
Glycoside hydrolase family 18 protein (316 aa)
         
  0.698
EHK21574
Hypothetical protein (324 aa)
         
  0.698
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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