STRINGSTRING
CK1c protein (Hypocrea virens) - STRING interaction network
"CK1c" - Casein kinase 1 in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CK1cCasein kinase 1 (468 aa)    
Predicted Functional Partners:
EHK24877
Hypothetical protein (485 aa)
       
  0.921
EHK22190
Hypothetical protein (420 aa)
       
  0.849
EHK18175
Hypothetical protein (1161 aa)
     
      0.831
CDK1
Hypothetical protein (335 aa)
   
  0.811
EHK18348
Hypothetical protein (812 aa)
     
  0.801
PKA4
Hypothetical protein (383 aa)
   
  0.792
EHK23311
Putative photolyase class 1 (627 aa)
       
  0.775
EHK22578
Photolyase (573 aa)
       
  0.775
EHK19098
DNA photolyase (630 aa)
       
  0.775
EHK18550
Hypothetical protein (934 aa)
       
  0.773
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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