STRINGSTRING
EHK22400 protein (Hypocrea virens) - STRING interaction network
"EHK22400" - Hypothetical protein in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHK22400Hypothetical protein (1118 aa)    
Predicted Functional Partners:
EHK22525
DNA lyase (630 aa)
     
 
  0.746
EHK16209
Hypothetical protein (550 aa)
     
 
  0.726
EHK15419
Hypothetical protein (914 aa)
       
 
  0.706
EHK20312
Hypothetical protein (647 aa)
     
 
  0.614
EHK18522
Hypothetical protein (465 aa)
     
 
  0.569
EHK16617
Hypothetical protein; Single-stranded DNA-dependent ATP-dependent helicase (714 aa)
       
  0.558
EHK24369
Hypothetical protein (226 aa)
     
 
  0.546
EHK19186
Hypothetical protein (293 aa)
     
 
    0.542
EHK26532
Hypothetical protein (585 aa)
     
 
  0.536
EHK26812
Hypothetical protein (574 aa)
   
 
    0.533
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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