STRINGSTRING
EHK22525 protein (Hypocrea virens) - STRING interaction network
"EHK22525" - DNA lyase in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHK22525DNA lyase (630 aa)    
Predicted Functional Partners:
EHK17555
Hypothetical protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (259 aa)
     
  0.887
EHK16385
Hypothetical protein (429 aa)
     
  0.877
EHK26220
Hypothetical protein (249 aa)
 
 
  0.871
EHK21183
Hypothetical protein (624 aa)
       
  0.854
EHK15744
Hypothetical protein (396 aa)
     
  0.811
EHK24417
Hypothetical protein (1045 aa)
     
  0.789
EHK25498
Hypothetical protein (410 aa)
     
  0.787
EHK23444
Hypothetical protein; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts as a [...] (395 aa)
     
  0.777
EHK22518
Hypothetical protein (1564 aa)
     
  0.752
EHK22400
Hypothetical protein (1118 aa)
     
 
  0.746
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
Server load: low (10%) [HD]