STRINGSTRING
EHK22578 protein (Hypocrea virens) - STRING interaction network
"EHK22578" - Photolyase in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHK22578Photolyase (573 aa)    
Predicted Functional Partners:
CK1c
Casein kinase 1 (468 aa)
       
  0.775
CK1a
Casein kinase I (370 aa)
       
  0.775
EHK27234
Hypothetical protein (1135 aa)
       
  0.720
EHK21333
Hypothetical protein (2232 aa)
         
  0.538
EHK19686
Hypothetical protein (719 aa)
         
  0.526
EHK16520
Hypothetical protein (696 aa)
         
  0.526
EHK26604
Hypothetical protein (525 aa)
 
          0.473
EHK21146
Hypothetical protein (516 aa)
     
  0.459
EHK19130
Hypothetical protein (1309 aa)
       
  0.425
EHK25987
Hypothetical protein (610 aa)
       
  0.419
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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