STRINGSTRING
EHK23211 protein (Hypocrea virens) - STRING interaction network
"EHK23211" - 26S proteasome Rpn9 subunit-like protein in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHK2321126S proteasome Rpn9 subunit-like protein (382 aa)    
Predicted Functional Partners:
EHK23825
Hypothetical protein (484 aa)
     
  0.998
EHK18939
Hypothetical protein (482 aa)
     
  0.998
EHK23463
Hypothetical protein (551 aa)
     
  0.997
EHK26683
Hypothetical protein (342 aa)
     
  0.997
EHK24415
Hypothetical protein (423 aa)
     
  0.997
EHK25020
Hypothetical protein (283 aa)
     
  0.996
EHK26425
Hypothetical protein (391 aa)
     
  0.996
EHK23454
Hypothetical protein (421 aa)
     
  0.995
EHK19073
Hypothetical protein (337 aa)
     
  0.994
EHK16049
Hypothetical protein (389 aa)
     
  0.994
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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