STRINGSTRING
tmk1 protein (Hypocrea virens) - STRING interaction network
"tmk1" - Mitogen activated protein kinase tmk1 in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmk1Mitogen activated protein kinase tmk1 (356 aa)    
Predicted Functional Partners:
EHK16503
Hypothetical protein (501 aa)
   
0.982
EHK26366
Hypothetical protein (2144 aa)
       
  0.958
EHK16052
Hypothetical protein (924 aa)
       
  0.958
EHK17019
Hypothetical protein (649 aa)
     
0.945
SKN7
Two-component response regulator receiver (590 aa)
       
  0.931
EHK19662
Hypothetical protein (704 aa)
       
  0.929
EHK23570
Hypothetical protein (456 aa)
       
  0.924
EHK24636
Hypothetical protein (670 aa)
       
  0.923
EHK16721
STE12-like protein (670 aa)
       
  0.923
EHK24551
Hypothetical protein (491 aa)
   
0.879
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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