STRINGSTRING
TSR3 protein (Hypocrea virens) - STRING interaction network
"TSR3" - Hypothetical protein in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSR3Hypothetical protein; Ribosome biogenesis protein required for processing 35S pre-rRNA at site D (421 aa)    
Predicted Functional Partners:
EHK16541
Hypothetical protein (259 aa)
 
 
   
  0.617
EHK15394
Hypothetical protein (727 aa)
     
      0.497
EHK26068
Hypothetical protein (266 aa)
       
      0.481
PRP4
Serine/threonine protein kinase, PRP4 pre-messenger RNA processing 4 (840 aa)
       
      0.481
EHK17673
Hypothetical protein (2372 aa)
       
      0.481
EHK18348
Hypothetical protein (812 aa)
     
   
  0.456
EHK23891
Hypothetical protein (210 aa)
     
 
  0.454
EHK23759
Hypothetical protein (943 aa)
       
      0.433
EHK23333
Hypothetical protein (414 aa)
     
   
  0.407
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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