STRINGSTRING
SKN7 protein (Hypocrea virens) - STRING interaction network
"SKN7" - Two-component response regulator receiver in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKN7Two-component response regulator receiver (590 aa)    
Predicted Functional Partners:
EHK15456
Hypothetical protein (2023 aa)
   
0.995
EHK18717
Histidine phosphotransferase HPT1 (149 aa)
       
  0.994
EHK19662
Hypothetical protein (704 aa)
       
  0.983
EHK23888
Hypothetical protein (576 aa)
       
 
  0.978
EHK15785
Histidine kinase NIK-1 (1289 aa)
   
0.970
EHK26366
Hypothetical protein (2144 aa)
     
  0.959
EHK16290
Hypothetical protein (1141 aa)
   
0.953
EHK27412
Hypothetical protein (462 aa)
   
  0.936
EHK20265
Hypothetical protein (399 aa)
   
  0.936
EHK18360
Hypothetical protein (434 aa)
   
  0.936
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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