STRINGSTRING
EHK23427 protein (Hypocrea virens) - STRING interaction network
"EHK23427" - COPII component protein in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHK23427COPII component protein (1041 aa)    
Predicted Functional Partners:
EHK27502
Sec23 protein (771 aa)
     
  0.987
EHK24491
COPII component protein (1257 aa)
     
  0.966
EHK25010
COPII component protein (305 aa)
     
  0.916
EHK26060
Hypothetical protein (218 aa)
     
  0.870
EHK15580
Secretion-associated and ras-related protein (189 aa)
     
  0.869
EHK22716
Hypothetical protein (321 aa)
     
  0.785
EHK23253
COPII component protein (792 aa)
     
0.756
EHK15694
Hypothetical protein (331 aa)
     
  0.752
EHK22599
Adaptor protein complex; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (918 aa)
     
  0.740
EHK27050
Hypothetical protein (243 aa)
     
  0.736
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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