STRINGSTRING
EHK23738 protein (Hypocrea virens) - STRING interaction network
"EHK23738" - Hypothetical protein in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHK23738Hypothetical protein (380 aa)    
Predicted Functional Partners:
EHK26941
Hypothetical protein (819 aa)
 
            0.634
EHK25251
Hypothetical protein (1196 aa)
   
   
  0.446
EHK23538
Hypothetical protein (731 aa)
   
   
  0.446
EHK23444
Hypothetical protein; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts as a [...] (395 aa)
   
   
  0.446
EHK17109
Hypothetical protein (787 aa)
   
   
  0.446
EHK18824
Hypothetical protein (1102 aa)
   
   
  0.441
EHK26597
Hypothetical protein (430 aa)
     
 
  0.429
EHK24980
Hypothetical protein (320 aa)
     
 
  0.429
EHK21183
Hypothetical protein (624 aa)
     
 
  0.429
EHK15814
Hypothetical protein (442 aa)
     
 
  0.429
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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