STRINGSTRING
EHK23939 protein (Hypocrea virens) - STRING interaction network
"EHK23939" - Hypothetical protein in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHK23939Hypothetical protein (1091 aa)    
Predicted Functional Partners:
EHK23245
Hypothetical protein (1162 aa)
     
0.988
EHK16917
Hypothetical protein (381 aa)
     
  0.977
EHK22704
Hypothetical protein (308 aa)
       
  0.971
EHK22163
Hypothetical protein; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1646 aa)
     
 
  0.912
EHK24776
Hypothetical protein (599 aa)
     
  0.908
EHK24586
Hypothetical protein (1192 aa)
     
 
  0.902
EHK18866
Hypothetical protein (660 aa)
     
  0.902
EHK20353
Hypothetical protein (326 aa)
     
  0.892
EHK23734
Hypothetical protein (1600 aa)
     
 
  0.859
EHK21055
Hypothetical protein; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases (1160 aa)
     
  0.854
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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