STRINGSTRING
EHK24550 protein (Hypocrea virens) - STRING interaction network
"EHK24550" - Hypothetical protein in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHK24550Hypothetical protein (544 aa)    
Predicted Functional Partners:
EHK27410
Hypothetical protein (882 aa)
     
  0.952
EHK25300
Hypothetical protein (700 aa)
   
 
0.939
EHK26204
Hypothetical protein (528 aa)
     
 
  0.925
EHK24241
Hypothetical protein (479 aa)
   
 
0.924
EHK27222
Hypothetical protein (612 aa)
     
 
  0.923
EHK27205
Hypothetical protein; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2 (658 aa)
     
 
  0.916
EHK24754
Hypothetical protein (1337 aa)
     
 
  0.915
EHK27210
Hypothetical protein (903 aa)
     
 
    0.915
EHK18349
Hypothetical protein (555 aa)
     
 
    0.911
EHK18373
Hypothetical protein (402 aa)
     
 
    0.909
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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