STRINGSTRING
TPK4 protein (Hypocrea virens) - STRING interaction network
"TPK4" - Serine/threonine protein kinase, AGC family in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPK4Serine/threonine protein kinase, AGC family (397 aa)    
Predicted Functional Partners:
EHK16386
Hypothetical protein (1137 aa)
     
  0.996
EHK24118
Hypothetical protein (232 aa)
     
  0.995
EHK24895
Hypothetical protein (348 aa)
     
  0.991
EHK26527
Hypothetical protein (837 aa)
     
0.990
EHK20696
Hypothetical protein (762 aa)
       
  0.987
EHK21514
Hypothetical protein (732 aa)
     
  0.949
TPK5
Serine/threonine protein kinase (985 aa)
     
0.938
EHK24921
Hypothetical protein (824 aa)
     
  0.937
CDK1
Hypothetical protein (335 aa)
   
0.916
EHK25158
Hypothetical protein (1000 aa)
     
  0.893
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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