STRINGSTRING
EHK24843 protein (Hypocrea virens) - STRING interaction network
"EHK24843" - Hypothetical protein in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHK24843Hypothetical protein (1094 aa)    
Predicted Functional Partners:
EHK24847
Hypothetical protein (1658 aa)
     
  0.847
EHK27346
Hypothetical protein (120 aa)
       
  0.824
EHK26532
Hypothetical protein (585 aa)
     
  0.810
EHK27137
Hypothetical protein (600 aa)
     
    0.807
EHK21504
Hypothetical protein (319 aa)
       
  0.784
EHK20259
Hypothetical protein (128 aa)
       
  0.752
EHK17011
Hypothetical protein (2760 aa)
     
  0.748
EHK22436
Hypothetical protein (929 aa)
       
  0.744
EHK16612
Hypothetical protein; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (660 aa)
     
  0.695
EHK15740
Hypothetical protein (860 aa)
     
 
  0.690
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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