STRINGSTRING
EHK24903 protein (Hypocrea virens) - STRING interaction network
"EHK24903" - Hypothetical protein in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHK24903Hypothetical protein (772 aa)    
Predicted Functional Partners:
EHK20629
Hypothetical protein; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non-functional ribosomes and degrade damaged mRNAs (408 aa)
     
  0.985
EHK27274
Hypothetical protein (529 aa)
       
  0.940
EHK24693
Hypothetical protein (436 aa)
     
  0.937
EHK26633
Hypothetical protein (348 aa)
       
  0.937
EHK22674
Hypothetical protein (245 aa)
       
  0.932
EHK18843
Hypothetical protein (293 aa)
       
  0.927
EHK18864
Hypothetical protein (338 aa)
       
  0.926
EHK17579
Hypothetical protein (247 aa)
       
  0.919
EHK27183
Hypothetical protein (331 aa)
       
  0.902
EHK23837
Hypothetical protein; Binds the poly(A) tail of mRNA (747 aa)
     
  0.868
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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