STRINGSTRING
EHK25010 protein (Hypocrea virens) - STRING interaction network
"EHK25010" - COPII component protein in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHK25010COPII component protein (305 aa)    
Predicted Functional Partners:
EHK23686
Hypothetical protein (1948 aa)
       
  0.993
EHK27502
Sec23 protein (771 aa)
     
  0.985
EHK22174
Hypothetical protein (432 aa)
     
0.985
EHK24491
COPII component protein (1257 aa)
     
  0.984
EHK16479
Hypothetical protein (917 aa)
     
  0.981
EHK27188
Hypothetical protein (1375 aa)
     
  0.979
EHK26473
Hypothetical protein (1155 aa)
       
  0.970
EHK23253
COPII component protein (792 aa)
     
  0.933
EHK23427
COPII component protein (1041 aa)
     
  0.916
EHK15580
Secretion-associated and ras-related protein (189 aa)
     
  0.855
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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