STRINGSTRING
PRP4 protein (Hypocrea virens) - STRING interaction network
"PRP4" - Serine/threonine protein kinase, PRP4 pre-messenger RNA processing 4 in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRP4Serine/threonine protein kinase, PRP4 pre-messenger RNA processing 4 (840 aa)    
Predicted Functional Partners:
EHK25402
Hypothetical protein (983 aa)
     
      0.968
EHK17673
Hypothetical protein (2372 aa)
     
 
  0.927
EHK20383
Hypothetical protein (844 aa)
     
      0.902
EHK25524
Hypothetical protein (928 aa)
     
 
  0.628
EHK22331
Hypothetical protein (755 aa)
       
      0.556
EHK19237
Hypothetical protein (787 aa)
       
      0.556
EHK17623
Hypothetical protein (1062 aa)
       
      0.556
TSR3
Hypothetical protein; Ribosome biogenesis protein required for processing 35S pre-rRNA at site D (421 aa)
       
      0.481
EHK26410
Hypothetical protein (2201 aa)
     
 
  0.417
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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