STRINGSTRING
EHK25243 protein (Hypocrea virens) - STRING interaction network
"EHK25243" - Ubiquitin-protein ligase in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHK25243Ubiquitin-protein ligase (763 aa)    
Predicted Functional Partners:
EHK15180
Hypothetical protein (853 aa)
     
  0.973
EHK18418
Hypothetical protein (516 aa)
     
  0.973
EHK18805
Hypothetical protein (819 aa)
     
  0.934
EHK21028
Hypothetical protein; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (244 aa)
       
  0.857
EHK27289
Hypothetical protein; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (259 aa)
       
  0.848
EHK25737
Hypothetical protein (370 aa)
       
 
  0.770
EHK17219
Hypothetical protein (2310 aa)
     
  0.761
EHK22646
Hypothetical protein (785 aa)
     
  0.760
EHK21099
Hypothetical protein (792 aa)
     
  0.760
EHK17449
Hypothetical protein (700 aa)
     
  0.760
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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