STRINGSTRING
EHK25456 protein (Hypocrea virens) - STRING interaction network
"EHK25456" - Hypothetical protein in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHK25456Hypothetical protein; Involved in nucleolar processing of pre-18S ribosomal RNA (263 aa)    
Predicted Functional Partners:
EHK26539
Hypothetical protein (726 aa)
     
  0.960
EHK26320
Hypothetical protein (297 aa)
     
 
  0.954
EHK23285
Hypothetical protein (572 aa)
     
 
  0.948
EHK18745
Hypothetical protein (413 aa)
     
 
  0.944
EHK27425
Hypothetical protein (308 aa)
     
 
    0.934
EHK26453
Hypothetical protein (317 aa)
     
 
  0.930
EHK15122
Hypothetical protein (392 aa)
     
   
  0.928
EHK26048
Hypothetical protein (312 aa)
     
   
  0.920
EHK18266
Hypothetical protein (371 aa)
     
   
  0.919
EHK22653
Hypothetical protein; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (320 aa)
     
 
  0.910
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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