STRINGSTRING
CK1b protein (Hypocrea virens) - STRING interaction network
"CK1b" - Casein kinase I in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CK1bCasein kinase I (453 aa)    
Predicted Functional Partners:
EHK16690
Putative mating type pheromone G-protein coupled receptor (374 aa)
       
  0.688
CK1a
Casein kinase I (370 aa)
     
0.679
CK1c
Casein kinase 1 (468 aa)
     
0.641
YPK3
Serine/threonine protein kinase, AGC family (626 aa)
       
  0.577
PKA1
Camp-dependent protein kinase catalytic subunit (548 aa)
       
0.574
PKA4
Hypothetical protein (383 aa)
       
0.571
EHK19727
Hypothetical protein (1163 aa)
     
  0.549
EHK16610
Hypothetical protein (617 aa)
       
  0.547
EHK22284
Hypothetical protein (409 aa)
       
  0.547
EHK27525
Hypothetical protein (361 aa)
       
  0.547
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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