STRINGSTRING
EHK26220 protein (Hypocrea virens) - STRING interaction network
"EHK26220" - Hypothetical protein in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHK26220Hypothetical protein (249 aa)    
Predicted Functional Partners:
EHK22525
DNA lyase (630 aa)
 
 
  0.871
EHK17040
Hypothetical protein (178 aa)
 
            0.742
EHK16109
Hypothetical protein (384 aa)
     
 
  0.724
EHK15412
Hypothetical protein (690 aa)
 
 
 
  0.694
EHK22436
Hypothetical protein (929 aa)
     
 
  0.666
EHK25646
Hypothetical protein (439 aa)
 
            0.666
EHK18522
Hypothetical protein (465 aa)
       
 
  0.635
EHK21333
Hypothetical protein (2232 aa)
         
  0.618
EHK16385
Hypothetical protein (429 aa)
   
 
  0.586
EHK20713
Hypothetical protein (1373 aa)
   
 
  0.585
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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