STRINGSTRING
PDK1 protein (Hypocrea virens) - STRING interaction network
"PDK1" - Serine/threonine protein kinase, AGC family in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDK1Serine/threonine protein kinase, AGC family (754 aa)    
Predicted Functional Partners:
YPK2
Serine/threonine protein kinase, AGC family (644 aa)
     
0.956
YPK1
Serine/threonine protein kinase, AGC family (629 aa)
     
0.954
EHK24742
Hypothetical protein (513 aa)
     
0.953
EHK27180
Hypothetical protein (381 aa)
       
0.899
EHK17694
Hypothetical protein (444 aa)
       
0.898
PKC1
Serine/threonine protein kinase (519 aa)
       
0.897
EHK19769
Hypothetical protein (352 aa)
       
0.897
PKC2
Protein kinase C (1134 aa)
     
0.869
EHK19662
Hypothetical protein (704 aa)
       
  0.846
EHK18162
Hypothetical protein (843 aa)
       
0.650
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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