STRINGSTRING
ypt1 protein (Hypocrea virens) - STRING interaction network
"ypt1" - Secretion-related small GTPase YPT1 in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ypt1Secretion-related small GTPase YPT1 (202 aa)    
Predicted Functional Partners:
EHK23998
Hypothetical protein (189 aa)
     
  0.970
EHK22390
Hypothetical protein (463 aa)
     
 
  0.941
EHK22648
Secretion-related small GTPase (203 aa)
   
 
0.925
EHK26089
Hypothetical protein (379 aa)
       
 
  0.903
EHK18865
Hypothetical protein (504 aa)
     
 
  0.897
EHK24678
Hypothetical protein (145 aa)
       
  0.887
EHK25021
Hypothetical protein (169 aa)
       
  0.851
EHK16361
Hypothetical protein (997 aa)
     
  0.850
EHK25970
Hypothetical protein (213 aa)
       
  0.842
EHK22716
Hypothetical protein (321 aa)
     
  0.838
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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