STRINGSTRING
EHK26731 protein (Hypocrea virens) - STRING interaction network
"EHK26731" - SEC16 protein in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHK26731SEC16 protein (1824 aa)    
Predicted Functional Partners:
EHK25010
COPII component protein (305 aa)
         
  0.562
EHK24491
COPII component protein (1257 aa)
         
  0.531
EHK15580
Secretion-associated and ras-related protein (189 aa)
         
  0.520
EHK23427
COPII component protein (1041 aa)
         
  0.509
EHK23253
COPII component protein (792 aa)
         
  0.509
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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