STRINGSTRING
CCK1 protein (Hypocrea virens) - STRING interaction network
"CCK1" - Serine threonine protein kinase CMGC group in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK1Serine threonine protein kinase CMGC group (322 aa)    
Predicted Functional Partners:
EHK19296
Hypothetical protein (999 aa)
     
  0.986
EHK25231
Hypothetical protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1757 aa)
     
  0.972
EHK24740
Hypothetical protein (436 aa)
     
  0.972
EHK20686
Hypothetical protein (418 aa)
     
  0.970
EHK19452
Hypothetical protein (351 aa)
     
  0.872
EHK18706
Hypothetical protein (322 aa)
       
  0.845
EHK15166
Hypothetical protein (394 aa)
     
  0.791
EHK27271
Hypothetical protein (797 aa)
     
  0.788
EHK22176
Hypothetical protein (306 aa)
       
  0.780
EHK25250
Hypothetical protein (304 aa)
       
  0.775
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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