STRINGSTRING
EHK27300 protein (Hypocrea virens) - STRING interaction network
"EHK27300" - Hypothetical protein in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHK27300Hypothetical protein (487 aa)    
Predicted Functional Partners:
EHK25642
Hypothetical protein (242 aa)
   
  0.997
EHK15538
Hypothetical protein (593 aa)
   
 
  0.994
EHK15174
Hypothetical protein (248 aa)
   
 
  0.991
EHK18266
Hypothetical protein (371 aa)
     
 
  0.990
EHK23263
Hypothetical protein (209 aa)
     
  0.989
EHK19136
Hypothetical protein (784 aa)
     
 
  0.989
EHK23729
Hypothetical protein (510 aa)
   
 
  0.986
EHK26441
Hypothetical protein (553 aa)
     
 
  0.977
EHK22389
Hypothetical protein; Involved in the biogenesis of the 60S ribosomal subunit (658 aa)
     
 
  0.977
EHK22653
Hypothetical protein; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (320 aa)
     
 
  0.970
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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