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EHK27417 protein (Hypocrea virens) - STRING interaction network
"EHK27417" - Carbohydrate-binding module family 48 protein in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHK27417Carbohydrate-binding module family 48 protein (470 aa)    
Predicted Functional Partners:
EHK16520
Hypothetical protein (696 aa)
     
  0.990
EHK20121
Hypothetical protein (328 aa)
     
  0.990
EHK19038
Hypothetical protein (455 aa)
     
  0.970
EHK25003
Hypothetical protein (1115 aa)
     
  0.970
EHK19686
Hypothetical protein (719 aa)
     
  0.969
EHK21162
Hypothetical protein (2290 aa)
       
  0.852
EHK25905
Ca2+ transporter (1042 aa)
       
  0.838
EHK24221
Hypothetical protein (538 aa)
       
  0.838
EHK18162
Hypothetical protein (843 aa)
       
  0.838
TPK2
Serine/threonine protein kinase, AGC family (632 aa)
       
  0.838
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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