STRINGSTRING
EHK27502 protein (Hypocrea virens) - STRING interaction network
"EHK27502" - Sec23 protein in Hypocrea virens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHK27502Sec23 protein (771 aa)    
Predicted Functional Partners:
EHK24491
COPII component protein (1257 aa)
     
  0.994
EHK23253
COPII component protein (792 aa)
     
0.990
EHK23427
COPII component protein (1041 aa)
     
  0.987
EHK25010
COPII component protein (305 aa)
     
  0.985
EHK15580
Secretion-associated and ras-related protein (189 aa)
     
  0.981
EHK26060
Hypothetical protein (218 aa)
     
  0.931
EHK15694
Hypothetical protein (331 aa)
     
  0.926
EHK22599
Adaptor protein complex; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (918 aa)
     
 
  0.913
ypt1
Secretion-related small GTPase YPT1 (202 aa)
     
  0.827
EHK26951
Adaptor protein; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (963 aa)
     
  0.823
Your Current Organism:
Hypocrea virens
NCBI taxonomy Id: 29875
Other names: Gliocladium flavofuscum, Gliocladium virens, H. virens, Hypocrea virens, Trichoderma flavofuscum, Trichoderma virens
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