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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCNF1Potassium voltage-gated channel subfamily F member 1; Belongs to the potassium channel family. (487 aa)    
Predicted Functional Partners:
ENSLSDP00000008068
annotation not available
   
 0.925
KCNAB1
Voltage-gated potassium channel subunit beta-1.
    
 0.749
KCNAB2
Voltage-gated potassium channel subunit beta-2.
    
 0.749
RPL23A
60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
   
 0.694
RPL31
60S ribosomal protein L31.
   
 0.691
RPL35
60S ribosomal protein L35.
   
 0.690
RPL29
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.689
RPL35A
60S ribosomal protein L35a.
   
 0.684
RPL24
60S ribosomal protein L24.
   
 0.682
RPL32
Large subunit ribosomal protein L32e.
   
 0.680
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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