STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110477472Alkaline phosphatase. (575 aa)    
Predicted Functional Partners:
ACP1
Low molecular weight phosphotyrosine protein phosphatase.
    
 0.913
ALPL
Alkaline phosphatase.
  
  
 
0.902
TPK1
Thiamine pyrophosphokinase; Belongs to the thiamine pyrophosphokinase family.
     
  0.900
GCH1
GTP cyclohydrolase 1.
   
 
  0.900
NTPCR
Cancer-related nucleoside-triphosphatase.
     
  0.900
PSAT1
Phosphoserine aminotransferase.
     
 0.857
AGXT
Serine--pyruvate aminotransferase.
     
 0.843
NADK
NAD kinase.
   
 
  0.831
TRIP11
Thyroid receptor-interacting protein 11.
   
 0.606
NUDT12
Peroxisomal NADH pyrophosphatase NUDT12.
   
 0.533
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.