STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SH3GL1Endophilin-A2. (339 aa)    
Predicted Functional Partners:
GAK
Cyclin-G-associated kinase.
   
 0.971
CBL
E3 ubiquitin-protein ligase CBL.
    
 0.886
CBLB
E3 ubiquitin-protein ligase CBL-B.
    
 0.886
EGFR
Receptor protein-tyrosine kinase.
    
 0.787
SYNJ1
Synaptojanin-1.
    
 
 0.741
DNAJC6
Putative tyrosine-protein phosphatase auxilin.
   
 0.707
IGF1R
Tyrosine-protein kinase receptor.
    
  0.694
MET
Hepatocyte growth factor receptor.
    
 0.677
MST1R
Macrophage-stimulating protein receptor.
    
 0.674
SYNJ2
Synaptojanin-2.
    
 
 0.668
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: medium (72%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.