STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000002307annotation not available (112 aa)    
Predicted Functional Partners:
SNRPE
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.787
SNRPD3
Small nuclear ribonucleoprotein Sm D3.
   
 0.786
SNRPG
Small nuclear ribonucleoprotein G.
   
 0.784
SNRPF
Small nuclear ribonucleoprotein F.
   
 0.773
PHF5A
PHD finger-like domain-containing protein 5A.
   
 0.757
SF3B6
Splicing factor 3B subunit 6.
   
 0.757
SF3B1
Splicing factor 3B subunit 1.
   
 0.745
LRMDA
Leucine-rich repeat-containing protein C10orf11.
   
 0.740
SNRPA1
U2 small nuclear ribonucleoprotein A.
   
 0.740
SF3B4
Splicing factor 3B subunit 4.
   
 0.733
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.