STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2-EB1H-2 class II histocompatibility antigen, E-S beta chain. (267 aa)    
Predicted Functional Partners:
CD74
H-2 class II histocompatibility antigen gamma chain.
   
 0.838
RPS14
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 0.685
ZNF692
Zinc finger protein 692.
   
 0.647
RLOC_00006927
DUF1968 domain-containing protein.
   
  0.644
INS
Insulin; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver.
    
 
 0.633
HLA-DRA
Mamu class II histocompatibility antigen, DR alpha chain.
   
 0.567
CD4
T-cell surface glycoprotein CD4.
   
 0.564
RPL30
60S ribosomal protein L30.
    
  0.549
ENSLSDP00000017434
annotation not available
    
  0.549
CAMP
Cathelicidin antimicrobial peptide.
   
   0.534
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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