STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCDC2Doublecortin domain-containing protein 2. (385 aa)    
Predicted Functional Partners:
POT1
Protection of telomeres protein 1.
    
 
 0.678
DNAAF4
Dyslexia susceptibility 1 candidate gene 1.
      
 0.617
SHC3
SHC-transforming protein 3.
   
  
 0.571
MARK1
Non-specific serine/threonine protein kinase.
      
 0.568
NFASC
Neurofascin.
    
 0.547
LRP8
Low-density lipoprotein receptor-related protein 8.
      
 0.545
MAPK8IP1
C-Jun-amino-terminal kinase-interacting protein 1.
      
 0.544
MAP1B
Microtubule-associated protein 1B.
      
 0.531
IFT57
Intraflagellar transport protein 57.
      
 0.520
KIAA0319
Dyslexia-associated protein KIAA0319.
    
 
 0.516
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.