STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ICMTProtein-S-isoprenylcysteine O-methyltransferase. (294 aa)    
Predicted Functional Partners:
ZMPSTE24
CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.
    
 0.965
RCE1
CAAX prenyl protease 2.
   
 0.705
FNTA
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha.
      
 0.662
TBCCD1
TBCC domain-containing protein 1.
      
 0.605
POPDC3
Popeye domain-containing protein 3.
      
 0.559
CRTAM
Cytotoxic and regulatory T-cell molecule.
      
 0.558
GINS1
DNA replication complex GINS protein PSF1.
      
 0.556
RCC1
Regulator of chromosome condensation.
   
  
 0.552
BCKDHB
2-oxoisovalerate dehydrogenase subunit beta, mitochondrial.
      
 0.545
TLK2
Serine/threonine-protein kinase tousled-like 2.
      
 0.544
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.