STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110470319Cyclin-dependent kinase 11B. (735 aa)    
Predicted Functional Partners:
CCNC
Cyclin-C; Belongs to the cyclin family.
     
 0.621
CDK1
Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.
    
0.596
CEP135
Centrosomal protein.
    
 0.579
MAPRE1
Microtubule-associated protein RP/EB family member 1.
   
 
  0.569
CEP63
Centrosomal protein.
     
 0.565
CEP131
Centrosomal protein.
     
 0.564
ACTR1A
Alpha-centractin; Belongs to the actin family.
    
  0.563
HAUS8
HAUS augmin-like complex subunit 8.
     
 0.560
CEP78
Centrosomal protein.
     
 0.559
NDE1
Nuclear distribution protein nudE 1.
     
 0.559
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.