STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alg9ALG9 alpha-1,2-mannosyltransferase. (618 aa)    
Predicted Functional Partners:
alg12
ALG12 alpha-1,6-mannosyltransferase.
    
 0.928
alg6
ALG6 alpha-1,3-glucosyltransferase.
     
 0.913
acaca
acetyl-CoA carboxylase alpha.
  
 0.902
alg3
ALG3 alpha-1,3- mannosyltransferase.
     
 0.896
psmc2
Proteasome 26S subunit, ATPase 2.
  
 0.783
SDHB
Succinate dehydrogenase complex iron sulfur subunit B.
   
 0.777
oxsm
3-oxoacyl-ACP synthase, mitochondrial.
    
 0.774
psmd2
Proteasome 26S subunit, non-ATPase 2.
    
  0.773
BECN1
Beclin-1.
    
 0.770
psmd3
Proteasome 26S subunit, non-ATPase 3.
   
 0.769
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.