STRINGSTRING
JNHE01000001_gene122 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000001_gene122" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000001_gene122annotation not available (122 aa)    
Predicted Functional Partners:
JNHE01000001_gene121
annotation not available (152 aa)
 
        0.971
JNHE01000001_gene123
annotation not available (160 aa)
 
   
  0.901
JNHE01000001_gene124
annotation not available (184 aa)
              0.840
JNHE01000001_gene125
annotation not available (202 aa)
              0.755
JNHE01000001_gene127
annotation not available (101 aa)
              0.615
cmoM
tRNA 5-carboxymethoxyuridine methyltransferase; Catalyzes the methylation of 5-carboxymethoxyuridine (cmo5U) to form 5-methoxycarbonylmethoxyuridine (mcmo5U) at position 34 in tRNAs (249 aa)
              0.615
JNHE01000002_gene2167
annotation not available (383 aa)
   
          0.536
JNHE01000017_gene4586
annotation not available (197 aa)
   
          0.476
JNHE01000001_gene276
annotation not available (320 aa)
   
          0.463
JNHE01000001_gene145
annotation not available (62 aa)
   
          0.458
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
Server load: low (16%) [HD]