STRINGSTRING
JNHE01000001_gene133 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000001_gene133" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000001_gene133annotation not available (287 aa)    
Predicted Functional Partners:
JNHE01000056_gene3705
annotation not available (165 aa)
       
  0.808
JNHE01000001_gene132
annotation not available (1009 aa)
 
 
 
  0.716
JNHE01000064_gene115
annotation not available (300 aa)
   
          0.626
JNHE01000006_gene1136
annotation not available (302 aa)
   
     
  0.611
JNHE01000004_gene1705
annotation not available (312 aa)
   
        0.583
JNHE01000003_gene1992
annotation not available (294 aa)
   
          0.505
JNHE01000002_gene2278
annotation not available (296 aa)
   
          0.480
JNHE01000027_gene3033
annotation not available (308 aa)
   
          0.459
JNHE01000001_gene134
annotation not available (479 aa)
         
  0.456
JNHE01000046_gene3791
annotation not available (287 aa)
   
          0.445
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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