STRINGSTRING
JNHE01000001_gene139 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000001_gene139" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000001_gene139annotation not available (803 aa)    
Predicted Functional Partners:
JNHE01000032_gene899
Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins (227 aa)
   
  0.830
JNHE01000011_gene3676
annotation not available (265 aa)
   
  0.805
JNHE01000006_gene1162
annotation not available (298 aa)
   
  0.805
JNHE01000001_gene576
annotation not available (317 aa)
   
  0.805
JNHE01000031_gene696
annotation not available (620 aa)
   
   
  0.776
JNHE01000031_gene693
annotation not available (262 aa)
   
   
  0.738
JNHE01000001_gene138
annotation not available (305 aa)
 
   
  0.730
JNHE01000001_gene541
annotation not available (73 aa)
     
        0.721
JNHE01000015_gene4448
annotation not available (724 aa)
 
 
  0.695
JNHE01000018_gene3928
annotation not available (694 aa)
 
 
  0.672
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
Server load: low (15%) [HD]