STRINGSTRING
JNHE01000001_gene150 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000001_gene150" - Cyclic diguanosine monophosphate-binding protein in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000001_gene150Cyclic diguanosine monophosphate-binding protein; Binds the second messenger bis-(3’-5’) cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second- messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein (125 aa)    
Predicted Functional Partners:
JNHE01000007_gene1237
Chemotaxis protein methyltransferase; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP (270 aa)
   
 
 
  0.784
JNHE01000006_gene1156
annotation not available (272 aa)
       
 
  0.745
JNHE01000028_gene774
annotation not available (268 aa)
       
      0.730
JNHE01000032_gene934
annotation not available (415 aa)
       
 
  0.724
JNHE01000020_gene3969
annotation not available (269 aa)
       
      0.721
JNHE01000007_gene1299
annotation not available (275 aa)
   
          0.715
JNHE01000007_gene1234
annotation not available (111 aa)
   
          0.638
JNHE01000011_gene3688
annotation not available (149 aa)
   
          0.586
JNHE01000001_gene151
annotation not available (168 aa)
   
        0.573
JNHE01000003_gene2009
annotation not available (278 aa)
   
          0.563
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
Server load: low (12%) [HD]