STRINGSTRING
JNHE01000001_gene151 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000001_gene151" - annotation not available in Pseudomonas oleovorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000001_gene151annotation not available (168 aa)    
Predicted Functional Partners:
JNHE01000001_gene494
annotation not available (610 aa)
        0.895
JNHE01000004_gene1635
annotation not available (297 aa)
 
          0.726
JNHE01000007_gene1344
annotation not available (219 aa)
   
          0.677
JNHE01000011_gene3611
annotation not available (284 aa)
   
          0.614
JNHE01000001_gene150
Cyclic diguanosine monophosphate-binding protein; Binds the second messenger bis-(3’-5’) cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second- messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein (125 aa)
   
        0.573
JNHE01000002_gene2169
annotation not available (324 aa)
   
          0.569
JNHE01000002_gene2168
annotation not available (529 aa)
   
          0.545
JNHE01000002_gene2170
annotation not available (253 aa)
   
        0.503
JNHE01000006_gene1056
annotation not available (143 aa)
   
          0.475
JNHE01000002_gene2333
annotation not available (202 aa)
   
          0.470
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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