STRINGSTRING
JNHE01000001_gene186 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000001_gene186" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000001_gene186annotation not available (409 aa)    
Predicted Functional Partners:
JNHE01000001_gene188
annotation not available (347 aa)
 
   
  0.970
JNHE01000001_gene187
annotation not available (115 aa)
 
          0.940
JNHE01000001_gene180
annotation not available (1131 aa)
 
          0.790
JNHE01000014_gene2995
annotation not available (810 aa)
         
  0.783
JNHE01000002_gene2371
annotation not available (444 aa)
 
   
  0.781
JNHE01000001_gene185
annotation not available (229 aa)
 
          0.754
JNHE01000041_gene3155
annotation not available (456 aa)
       
  0.748
JNHE01000001_gene183
annotation not available (391 aa)
 
     
  0.747
JNHE01000018_gene3889
annotation not available (445 aa)
       
  0.743
ppc
Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family (878 aa)
   
 
    0.743
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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